SCI

24 June 2024

Determining the ERK-regulated phosphoproteome driving KRAS-mutant cancer

(Science, IF: 44.7)

  • Jennifer E. Klomp, J. Nathaniel Diehl, Jeffrey A. Klomp, A. Cole Edwards, Runying Yang, Alexis J. Morales, Khalilah E. Taylor, Kristina Drizyte-Miller, Kirsten L. Bryant, Antje Schaefer, Jared L. Johnson, Emily M. Huntsman, Tomer M. Yaron, Mariaelena Pierobon, Elisa Baldelli, Alex W. Prevatte, Natalie K. Barker, Laura E. Herring, Emanuel F. PetricoinIII, Lee M. Graves, Lewis C. Cantley, Adrienne D. Cox, Channing J. Der*, Clint A. Stalnecker

  • CORRESPONDENCE TO: jder@med.unc.edu (C.J.D.); clints@email.unc.edu (C.A.S.)

To delineate the mechanisms by which the ERK1 and ERK2 mitogen-activated protein kinases support mutant KRAS–driven cancer growth, we determined the ERK-dependent phosphoproteome in KRAS mutant pancreatic cancer. We determined that ERK1 and ERK2 share near-identical signaling and transforming outputs and that the KRAS-regulated phosphoproteome is driven nearly completely by ERK. We identified 4666 ERK-dependent phosphosites on 2123 proteins, of which 79 and 66%, respectively, were not previously associated with ERK, substantially expanding the depth and breadth of ERK-dependent phosphorylation events and revealing a considerably more complex function for ERK in cancer. We established that ERK controls a highly dynamic and complex phosphoproteome that converges on cyclin-dependent kinase regulation and RAS homolog guanosine triphosphatase function (RHO GTPase). Our findings establish the most comprehensive molecular portrait and mechanisms by which ERK drives KRAS-dependent pancreatic cancer growth.

为了明确ERK1和ERK2促有丝分裂原蛋白激酶支持突变型KRAS驱动的癌症生长的机制,我们确定了KRAS突变型胰腺癌中ERK依赖性磷酸蛋白质组。我们确定ERK1和ERK2共享几乎相同的信号传导和转化输出,KRAS-调节的磷酸蛋白质组几乎完全由ERK驱动。我们在2123种蛋白质上鉴定了4666个ERK依赖性磷酸化位点,其中79种和66%的位点在从前被认为与ERK无关,这大大扩展了ERK依赖型磷酸化位点的深度和广度,并揭示了ERK在癌症中更复杂的功能。我们确定ERK控制一个高度动态和复杂的磷酸化蛋白质组,该蛋白质组集中于细胞周期蛋白依赖性激酶调节和RAS同源物鸟苷三磷酸酶功能(RHO GTPase)。我们的发现建立了ERK驱动KRAS-依赖性胰腺癌生长的最全面的分子图谱和机制。