SCI

20 September 2024

DNA liquid biopsy-based prediction of cancer-associated venous thromboembolism

 (Nat Med, IF: 58.7)

  • Jee J, Brannon AR, Singh R, et al: DNA liquid biopsy-based prediction of cancer-associated venous thromboembolism. Nat Med 30:2499–2507, 2024

Abstract 摘要

Cancer-associated venous thromboembolism (VTE) is a major source of oncologic cost, morbidity and mortality. Identifying high-risk patients for prophylactic anticoagulation is challenging and adds to clinician burden. Circulating tumor DNA (ctDNA) sequencing assays ('liquid biopsies') are widely implemented, but their utility for VTE prognostication is unknown. Here we analyzed three plasma sequencing cohorts: a pan-cancer discovery cohort of 4,141 patients with non-small cell lung cancer (NSCLC) or breast, pancreatic and other cancers; a prospective validation cohort consisting of 1,426 patients with the same cancer types; and an international generalizability cohort of 463 patients with advanced NSCLC. ctDNA detection was associated with VTE independent of clinical and radiographic features. A machine learning model trained on liquid biopsy data outperformed previous risk scores (discovery, validation and generalizability c-indices 0.74, 0.73 and 0.67, respectively, versus 0.57, 0.61 and 0.54 for the Khorana score). In real-world data, anticoagulation was associated with lower VTE rates if ctDNA was detected (n = 2,522, adjusted hazard ratio (HR) = 0.50, 95% confidence interval (CI): 0.30-0.81); ctDNA- patients (n = 1,619) did not benefit from anticoagulation (adjusted HR = 0.89, 95% CI: 0.40-2.0). These results provide preliminary evidence that liquid biopsies may improve VTE risk stratification in addition to clinical parameters. Interventional, randomized prospective studies are needed to confirm the clinical utility of liquid biopsies for guiding anticoagulation in patients with cancer.

癌症相关静脉血栓栓塞症(VTE)是肿瘤费用、发病率和死亡率的主要来源。确定高危患者的预防性抗凝是具有挑战性的,并增加了临床医生的负担。循环肿瘤 DNA (ctDNA)测序分析(“液体活检”)被广泛应用,但它们对 VTE 预测的效用尚不清楚。在这里,我们分析了三个血浆测序队列: 4,141名非小细胞肺癌(NSCLC)或乳腺癌,胰腺癌和其他癌症患者的泛癌发现队列; 由1,426名相同癌症类型的患者组成的前瞻性验证队列; 以及463名晚期 NSCLC 患者的国际普遍性队列。ctDNA 检测与 VTE 无关,与临床和影像学特征无关。对液体活检数据进行训练的机器学习模型优于以前的风险评分(发现,验证和普遍性 c 指数分别为0.74,0.73和0.67,而 Khorana 评分为0.57,0.61和0.54)。在现实世界的数据中,如果检测到 ctDNA (n = 2,522,校正风险比(HR) = 0.50,95% 置信区间(CI) : 0.30-0.81) ,抗凝治疗与较低的 VTE 发生率相关; ctDNA阴性患者(n = 1,619)没有从抗凝治疗中受益(调整后的 HR = 0.89,95% CI: 0.40-2.0)。这些结果提供了初步的证据,液体活检可以改善静脉血栓栓塞危险分层除了临床参数。需要进行干预性随机前瞻研究,以确认液体活检指导癌症患者抗凝治疗的临床效用。